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SOAP-Match Web Interface
Species database: Fully funtional with IE6 and IE7 Cluster distribution:
 
Regular expression:

PROSITE examples:

ID MYRISTYL; PATTERN. AC PS00008 DE N-myristoylation site. PA G-{EDRKHPFYW}-x(2)-[STAGCN]-{P}.

ID PROKAR_LIPOPROTEIN; RULE. AC PS00013; DE Prokaryotic membrane lipoprotein lipid attachment site. PA {DERK}(6)-[LIVMFWSTAG](2)-[LIVMFYSTAGCQ]-[AGS]-C.

ID PRENYLATION; PATTERN. AC PS00294; DE Prenyl group binding site (CAAX box). PA C-{DENQ}-[LIVM]-x>.

ID ER_TARGET; PATTERN. AC PS00014; DE Endoplasmic reticulum targeting sequence. PA [KRHQSA]-[DENQ]-E-L>.

ID ATP_GTP_A; PATTERN. AC PS00017; DE ATP/GTP-binding site motif A (P-loop). PA [AG]-x(4)-G-K-[ST].

ID CNMP_BINDING_1; PATTERN. AC PS00888; DE Cyclic nucleotide-binding domain signature 1. PA [LIVM]-[VIC]-x-{H}-G-[DENQTA]-x-[GAC]-{L}-x-[LIVMFY](4)-x(2)-G.

ID PROKAR_NTER_METHYL; PATTERN. AC PS00409; DE Prokaryotic N-terminal methylation site. PA [KRHEQSTAG]-G-[FYLIVM]-[ST]-[LT]-[LIVP]-E-[LIVMFWSTAG](14).


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